Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM3Q9HCF6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM3Q9HCF6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRPM3Q9HCF6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM3Q9HCF6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRPM3Q9HCF6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM3Q9HCF6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRPM3Q9HCF6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM3Q9HCF6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 AHCYP2-201ENST00000430630 1300 ntBASIC21.29■■□□□ 1
TRPM3Q9HCF6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 HOMER2P2-201ENST00000451621 847 ntBASIC21.29■■□□□ 1
TRPM3Q9HCF6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRPM3Q9HCF6 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM3Q9HCF6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.29■■□□□ 1
TRPM3Q9HCF6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 ADM-202ENST00000524948 584 ntTSL 2 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 AP003171.2-201ENST00000528208 925 ntBASIC21.28■■□□□ 1
TRPM3Q9HCF6 AC023310.1-201ENST00000554836 735 ntBASIC21.28■■□□□ 1
TRPM3Q9HCF6 AC006453.4-201ENST00000636949 1252 ntBASIC21.28■■□□□ 1
TRPM3Q9HCF6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM3Q9HCF6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRPM3Q9HCF6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC21.27■■□□□ 1
TRPM3Q9HCF6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRPM3Q9HCF6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRPM3Q9HCF6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
TRPM3Q9HCF6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRPM3Q9HCF6 AP001094.4-201ENST00000579008 2176 ntBASIC21.27■□□□□ 0.99
TRPM3Q9HCF6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 EIF4HP1-201ENST00000453115 687 ntBASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 BX284668.4-201ENST00000453917 508 ntBASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 KRT18P25-201ENST00000508931 1278 ntBASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 KRT8P19-201ENST00000551916 1455 ntBASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
TRPM3Q9HCF6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms