Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MIR1199-201ENST00000621445 119 ntBASIC16.38■□□□□ 0.21
VPS11Q9H270 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS11Q9H270 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.38■□□□□ 0.21
VPS11Q9H270 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS11Q9H270 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS11Q9H270 AC012569.1-201ENST00000591191 1524 ntBASIC16.38■□□□□ 0.21
VPS11Q9H270 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS11Q9H270 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
VPS11Q9H270 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS11Q9H270 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS11Q9H270 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS11Q9H270 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS11Q9H270 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VPS11Q9H270 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS11Q9H270 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VPS11Q9H270 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VPS11Q9H270 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 AL592424.1-201ENST00000563624 1536 ntBASIC16.37■□□□□ 0.21
VPS11Q9H270 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS11Q9H270 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS11Q9H270 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS11Q9H270 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.37■□□□□ 0.21
VPS11Q9H270 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.37■□□□□ 0.21
VPS11Q9H270 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VPS11Q9H270 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS11Q9H270 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS11Q9H270 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 AC020658.6-201ENST00000623564 1870 ntBASIC16.37■□□□□ 0.21
VPS11Q9H270 AC092919.2-201ENST00000623631 1645 ntBASIC16.37■□□□□ 0.21
VPS11Q9H270 AC006486.2-201ENST00000624246 2199 ntBASIC16.37■□□□□ 0.21
VPS11Q9H270 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS11Q9H270 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS11Q9H270 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS11Q9H270 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
VPS11Q9H270 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VPS11Q9H270 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VPS11Q9H270 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VPS11Q9H270 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
VPS11Q9H270 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.36■□□□□ 0.21
VPS11Q9H270 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VPS11Q9H270 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
VPS11Q9H270 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.36■□□□□ 0.21
VPS11Q9H270 IGHV3-65-201ENST00000523210 341 ntBASIC16.36■□□□□ 0.21
VPS11Q9H270 AC012313.10-201ENST00000623509 926 ntBASIC16.36■□□□□ 0.21
VPS11Q9H270 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VPS11Q9H270 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VPS11Q9H270 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.36■□□□□ 0.21
VPS11Q9H270 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.36■□□□□ 0.21
VPS11Q9H270 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS11Q9H270 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS11Q9H270 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms