Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 HMGA1P7-201ENST00000406908 502 ntBASIC15.05■□□□□ -0
POLR2J3Q9H1A7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 KRT18P56-201ENST00000507275 550 ntBASIC15.05■□□□□ -0
POLR2J3Q9H1A7 AC012640.2-201ENST00000561606 901 ntBASIC15.05■□□□□ -0
POLR2J3Q9H1A7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 AC012313.10-201ENST00000623509 926 ntBASIC15.05■□□□□ -0
POLR2J3Q9H1A7 AC117500.6-201ENST00000624871 588 ntBASIC15.05■□□□□ -0
POLR2J3Q9H1A7 FAM215A-202ENST00000632077 792 ntBASIC15.05■□□□□ -0
POLR2J3Q9H1A7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.05■□□□□ -0
POLR2J3Q9H1A7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 AC108751.1-201ENST00000490852 363 ntBASIC15.04■□□□□ -0
POLR2J3Q9H1A7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 UNC93B7-201ENST00000509439 705 ntBASIC15.04■□□□□ -0
POLR2J3Q9H1A7 AC109635.5-201ENST00000533593 962 ntBASIC15.04■□□□□ -0
POLR2J3Q9H1A7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 AP002414.2-201ENST00000591780 3365 ntBASIC15.04■□□□□ -0
POLR2J3Q9H1A7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.04■□□□□ -0
POLR2J3Q9H1A7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms