Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 AL132655.2-201ENST00000596276 594 ntBASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 AC008494.3-201ENST00000606615 944 ntBASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 MIR8072-201ENST00000614241 80 ntBASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 AC025048.6-201ENST00000634326 1161 ntBASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 AC090340.1-201ENST00000620778 4980 ntBASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-3Q9BYR4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC087499.5-201ENST00000452760 1342 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms