Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 SNX18-202ENST00000343017 3140 ntBASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 KRT8P10-201ENST00000450021 1447 ntBASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 KRT8P49-201ENST00000604166 1432 ntBASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 AL391807.1-203ENST00000604392 2365 ntBASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 CICP13-201ENST00000422015 2789 ntBASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 AC007292.2-201ENST00000593524 1812 ntBASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ABHD17AP1-201ENST00000358206 933 ntBASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC128676.1-201ENST00000454392 318 ntBASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 EGLN1P1-201ENST00000531623 762 ntBASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AL136038.4-201ENST00000603606 1261 ntBASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC092666.2-201ENST00000613287 246 ntBASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC073912.3-201ENST00000624414 853 ntBASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms