Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC22CQ9BRL7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22CQ9BRL7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SEC22CQ9BRL7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22CQ9BRL7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22CQ9BRL7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC22CQ9BRL7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22CQ9BRL7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 AC013726.1-201ENST00000563747 2285 ntBASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 AL390719.2-201ENST00000606993 987 ntBASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.78□□□□□ -0.2
SEC22CQ9BRL7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SEC22CQ9BRL7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
SEC22CQ9BRL7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.77□□□□□ -0.2
SEC22CQ9BRL7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SEC22CQ9BRL7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SEC22CQ9BRL7 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SEC22CQ9BRL7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SEC22CQ9BRL7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SEC22CQ9BRL7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 HBZP1-201ENST00000354915 429 ntBASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 MIR662-201ENST00000384847 95 ntBASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 SPDYE15P-201ENST00000424157 909 ntBASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 CYP2D8P-201ENST00000433633 1490 ntBASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 AC243591.1-201ENST00000452967 1364 ntBASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 AC092597.1-201ENST00000487352 616 ntBASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 Z99916.2-201ENST00000604037 246 ntBASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 PGM5P2-202ENST00000637225 1043 ntBASIC13.77□□□□□ -0.21
SEC22CQ9BRL7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms