Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC21.07■□□□□ 0.96
ABCA3Q99758 AC092978.1-202ENST00000637590 1327 ntBASIC21.07■□□□□ 0.96
ABCA3Q99758 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC21.07■□□□□ 0.96
ABCA3Q99758 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCA3Q99758 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCA3Q99758 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC21.07■□□□□ 0.96
ABCA3Q99758 IGF1-203ENST00000392904 761 ntTSL 5 BASIC21.07■□□□□ 0.96
ABCA3Q99758 KRTAP19-9P-201ENST00000421795 191 ntBASIC21.07■□□□□ 0.96
ABCA3Q99758 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC21.07■□□□□ 0.96
ABCA3Q99758 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC21.07■□□□□ 0.96
ABCA3Q99758 CFL1-214ENST00000534769 758 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCA3Q99758 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
ABCA3Q99758 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCA3Q99758 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCA3Q99758 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCA3Q99758 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ABCA3Q99758 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCA3Q99758 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ABCA3Q99758 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCA3Q99758 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ABCA3Q99758 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCA3Q99758 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCA3Q99758 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCA3Q99758 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCA3Q99758 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.06■□□□□ 0.96
ABCA3Q99758 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCA3Q99758 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCA3Q99758 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCA3Q99758 MPV17-204ENST00000399052 749 ntTSL 4 BASIC21.06■□□□□ 0.96
ABCA3Q99758 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ABCA3Q99758 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC21.06■□□□□ 0.96
ABCA3Q99758 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC21.06■□□□□ 0.96
ABCA3Q99758 AC245884.6-201ENST00000515672 1067 ntBASIC21.06■□□□□ 0.96
ABCA3Q99758 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCA3Q99758 MIR5572-201ENST00000583188 137 ntBASIC21.06■□□□□ 0.96
ABCA3Q99758 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
ABCA3Q99758 AC244452.3-201ENST00000636814 210 ntBASIC21.06■□□□□ 0.96
ABCA3Q99758 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC21.06■□□□□ 0.96
ABCA3Q99758 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ABCA3Q99758 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCA3Q99758 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCA3Q99758 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCA3Q99758 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ABCA3Q99758 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ABCA3Q99758 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC21.05■□□□□ 0.96
ABCA3Q99758 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
ABCA3Q99758 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC21.05■□□□□ 0.96
ABCA3Q99758 FNTAP2-201ENST00000430308 634 ntBASIC21.05■□□□□ 0.96
ABCA3Q99758 MPRIPP1-201ENST00000452433 1089 ntBASIC21.05■□□□□ 0.96
ABCA3Q99758 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC21.05■□□□□ 0.96
ABCA3Q99758 AC013355.1-201ENST00000562625 723 ntBASIC21.05■□□□□ 0.96
ABCA3Q99758 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC21.05■□□□□ 0.96
ABCA3Q99758 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.05■□□□□ 0.96
ABCA3Q99758 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCA3Q99758 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ABCA3Q99758 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ABCA3Q99758 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ABCA3Q99758 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ABCA3Q99758 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC21.04■□□□□ 0.96
ABCA3Q99758 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC21.04■□□□□ 0.96
ABCA3Q99758 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC21.04■□□□□ 0.96
ABCA3Q99758 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.04■□□□□ 0.96
ABCA3Q99758 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.04■□□□□ 0.96
ABCA3Q99758 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ABCA3Q99758 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ABCA3Q99758 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ABCA3Q99758 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
ABCA3Q99758 HLA-DQB2-229ENST00000411527 1059 ntBASIC21.04■□□□□ 0.96
ABCA3Q99758 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC21.04■□□□□ 0.96
ABCA3Q99758 CYP46A4P-201ENST00000414953 267 ntBASIC21.04■□□□□ 0.96
ABCA3Q99758 FADS2-212ENST00000522639 360 ntTSL 5 BASIC21.04■□□□□ 0.96
ABCA3Q99758 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ABCA3Q99758 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
ABCA3Q99758 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC21.04■□□□□ 0.96
ABCA3Q99758 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC21.04■□□□□ 0.96
ABCA3Q99758 FADS2-215ENST00000574708 385 ntTSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms