Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 RCC2P8-201ENST00000502779 1035 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC092284.1-201ENST00000511386 1289 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 HNRNPA1P25-201ENST00000422644 937 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 GHSR-202ENST00000427970 912 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 RN7SL494P-201ENST00000461517 304 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC015910.1-201ENST00000579400 975 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 AC000095.1-201ENST00000603208 874 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 DRD5P1-201ENST00000456605 1438 ntBASIC4.79□□□□□ -1.64
HMCN1Q96RW7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC4.79□□□□□ -1.64
HMCN1Q96RW7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 LINC00634-202ENST00000505157 222 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 MIR4522-201ENST00000584932 87 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC008536.3-201ENST00000623282 1599 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 OR2K2-202ENST00000374428 1038 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC004837.1-201ENST00000446267 564 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ZACNP1-201ENST00000612259 710 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms