Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 AC026979.3-201ENST00000607315 403 ntBASIC16.71■□□□□ 0.27
RPRD1AQ96P16 AL118508.1-201ENST00000613502 2345 ntBASIC16.71■□□□□ 0.27
RPRD1AQ96P16 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
RPRD1AQ96P16 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RPRD1AQ96P16 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 TREML5P-201ENST00000421694 576 ntBASIC16.7■□□□□ 0.26
RPRD1AQ96P16 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 AL355385.1-201ENST00000606123 409 ntBASIC16.7■□□□□ 0.26
RPRD1AQ96P16 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 AC011270.2-201ENST00000624293 2550 ntBASIC16.7■□□□□ 0.26
RPRD1AQ96P16 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.7■□□□□ 0.26
RPRD1AQ96P16 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.69■□□□□ 0.26
RPRD1AQ96P16 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 FO538757.1-201ENST00000623083 1397 ntBASIC16.69■□□□□ 0.26
RPRD1AQ96P16 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 IGHV3-42-201ENST00000520410 361 ntBASIC16.69■□□□□ 0.26
RPRD1AQ96P16 BANF1P1-201ENST00000553684 263 ntBASIC16.69■□□□□ 0.26
RPRD1AQ96P16 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 RN7SL828P-201ENST00000607615 303 ntBASIC16.69■□□□□ 0.26
RPRD1AQ96P16 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 AC006449.5-201ENST00000610658 2098 ntBASIC16.69■□□□□ 0.26
RPRD1AQ96P16 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms