Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.51■□□□□ 0.23
RTP4Q96DX8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
RTP4Q96DX8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.51■□□□□ 0.23
RTP4Q96DX8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.51■□□□□ 0.23
RTP4Q96DX8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.51■□□□□ 0.23
RTP4Q96DX8 MIR4469-201ENST00000583919 79 ntBASIC16.51■□□□□ 0.23
RTP4Q96DX8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.51■□□□□ 0.23
RTP4Q96DX8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTP4Q96DX8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.51■□□□□ 0.23
RTP4Q96DX8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTP4Q96DX8 AC091812.2-201ENST00000619081 385 ntBASIC16.51■□□□□ 0.23
RTP4Q96DX8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTP4Q96DX8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTP4Q96DX8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTP4Q96DX8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTP4Q96DX8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTP4Q96DX8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTP4Q96DX8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTP4Q96DX8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.51■□□□□ 0.23
RTP4Q96DX8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 PRAL-201ENST00000624952 3286 ntBASIC16.5■□□□□ 0.23
RTP4Q96DX8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 AL135744.1-201ENST00000565098 629 ntBASIC16.5■□□□□ 0.23
RTP4Q96DX8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 AC027796.2-201ENST00000575326 344 ntBASIC16.5■□□□□ 0.23
RTP4Q96DX8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 AC024267.1-201ENST00000582320 895 ntBASIC16.5■□□□□ 0.23
RTP4Q96DX8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 AL596442.2-201ENST00000610240 980 ntBASIC16.5■□□□□ 0.23
RTP4Q96DX8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 C20orf181-201ENST00000623918 480 ntBASIC16.5■□□□□ 0.23
RTP4Q96DX8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RTP4Q96DX8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTP4Q96DX8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 AC013268.4-201ENST00000637413 2228 ntBASIC16.49■□□□□ 0.23
RTP4Q96DX8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 AL355385.1-201ENST00000606123 409 ntBASIC16.49■□□□□ 0.23
RTP4Q96DX8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 AC092902.6-201ENST00000641783 218 ntBASIC16.49■□□□□ 0.23
RTP4Q96DX8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 PPT1-215ENST00000641471 2368 ntBASIC16.49■□□□□ 0.23
RTP4Q96DX8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTP4Q96DX8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.49■□□□□ 0.23
RTP4Q96DX8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms