Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 AC073439.1-201ENST00000624121 1774 ntBASIC14.25□□□□□ -0.13
SPTSSAQ969W0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 PRYP6-201ENST00000514804 343 ntBASIC14.25□□□□□ -0.13
SPTSSAQ969W0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 SLC25A1P1-201ENST00000528351 927 ntBASIC14.24□□□□□ -0.13
SPTSSAQ969W0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 AP002472.1-201ENST00000577490 586 ntBASIC14.24□□□□□ -0.13
SPTSSAQ969W0 AL513190.1-201ENST00000621254 727 ntBASIC14.24□□□□□ -0.13
SPTSSAQ969W0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSAQ969W0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 LINC02447-202ENST00000501888 2146 ntBASIC14.23□□□□□ -0.13
SPTSSAQ969W0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 AC245100.5-201ENST00000452108 331 ntBASIC14.23□□□□□ -0.13
SPTSSAQ969W0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms