Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.36□□□□□ -0.11
AP3S1Q92572 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S1Q92572 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
AP3S1Q92572 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.35□□□□□ -0.11
AP3S1Q92572 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.35□□□□□ -0.11
AP3S1Q92572 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 ST20-AS1-201ENST00000560255 4223 ntBASIC14.35□□□□□ -0.11
AP3S1Q92572 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.35□□□□□ -0.11
AP3S1Q92572 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
AP3S1Q92572 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 FAM201B-201ENST00000458407 597 ntBASIC14.35□□□□□ -0.11
AP3S1Q92572 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.35□□□□□ -0.11
AP3S1Q92572 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 ITM2C-210ENST00000620962 501 ntBASIC14.35□□□□□ -0.11
AP3S1Q92572 AL138966.2-201ENST00000621997 464 ntBASIC14.35□□□□□ -0.11
AP3S1Q92572 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 AL390755.1-201ENST00000623716 2027 ntBASIC14.35□□□□□ -0.11
AP3S1Q92572 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
AP3S1Q92572 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.35□□□□□ -0.11
AP3S1Q92572 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S1Q92572 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S1Q92572 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S1Q92572 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
AP3S1Q92572 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 TSPY7P-201ENST00000431358 1114 ntBASIC14.34□□□□□ -0.11
AP3S1Q92572 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S1Q92572 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S1Q92572 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.34□□□□□ -0.11
AP3S1Q92572 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S1Q92572 CD99P1-205ENST00000527459 561 ntBASIC14.34□□□□□ -0.11
AP3S1Q92572 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.34□□□□□ -0.11
AP3S1Q92572 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.34□□□□□ -0.11
AP3S1Q92572 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.34□□□□□ -0.11
AP3S1Q92572 LINC01238-205ENST00000567549 1107 ntBASIC14.34□□□□□ -0.11
AP3S1Q92572 MIR4651-201ENST00000582622 73 ntBASIC14.34□□□□□ -0.11
AP3S1Q92572 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S1Q92572 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S1Q92572 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
AP3S1Q92572 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S1Q92572 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP3S1Q92572 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S1Q92572 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms