Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 RN7SL618P-201ENST00000477850 296 ntBASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 AC010336.2-201ENST00000564226 506 ntBASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHKBP1Q8TBC3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHKBP1Q8TBC3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHKBP1Q8TBC3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHKBP1Q8TBC3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.02■□□□□ 0.31
SHKBP1Q8TBC3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHKBP1Q8TBC3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.02■□□□□ 0.31
SHKBP1Q8TBC3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHKBP1Q8TBC3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHKBP1Q8TBC3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 AC007541.1-201ENST00000570282 1469 ntBASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 GNAQP1-201ENST00000444815 1067 ntBASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 API5-211ENST00000534695 560 ntTSL 5 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 AC104794.3-201ENST00000566840 1248 ntBASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHKBP1Q8TBC3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AC044860.1-202ENST00000559481 777 ntBASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AC006538.1-201ENST00000567905 1585 ntBASIC17■□□□□ 0.31
SHKBP1Q8TBC3 TP53TG3HP-202ENST00000569755 579 ntBASIC17■□□□□ 0.31
SHKBP1Q8TBC3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AC004790.1-201ENST00000612686 536 ntBASIC17■□□□□ 0.31
SHKBP1Q8TBC3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
SHKBP1Q8TBC3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 BTBD7P1-201ENST00000447253 1453 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms