Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL9Q8NET4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RTL9Q8NET4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 MIR658-201ENST00000385210 100 ntBASIC19.81■□□□□ 0.76
RTL9Q8NET4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 TARDBPP1-201ENST00000442013 1203 ntBASIC19.81■□□□□ 0.76
RTL9Q8NET4 AC022210.1-201ENST00000449856 793 ntBASIC19.81■□□□□ 0.76
RTL9Q8NET4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 AC011495.1-201ENST00000498085 584 ntBASIC19.81■□□□□ 0.76
RTL9Q8NET4 AC119751.2-201ENST00000504529 210 ntBASIC19.81■□□□□ 0.76
RTL9Q8NET4 TIMM17BP1-201ENST00000545713 516 ntBASIC19.81■□□□□ 0.76
RTL9Q8NET4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.81■□□□□ 0.76
RTL9Q8NET4 MIR6805-201ENST00000615055 62 ntBASIC19.81■□□□□ 0.76
RTL9Q8NET4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.81■□□□□ 0.76
RTL9Q8NET4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL9Q8NET4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 MIR4259-201ENST00000584466 101 ntBASIC19.8■□□□□ 0.76
RTL9Q8NET4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.8■□□□□ 0.76
RTL9Q8NET4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL9Q8NET4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
RTL9Q8NET4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL9Q8NET4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms