Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 AP000344.2-201ENST00000512987 629 ntBASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 LINC01225-203ENST00000563550 1244 ntBASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 AP000842.3-202ENST00000569238 1080 ntBASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 MIR4321-201ENST00000592276 80 ntBASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 AC055717.3-201ENST00000622967 595 ntBASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 AC084121.4-201ENST00000641598 221 ntBASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 AF228730.8-201ENST00000642140 221 ntBASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRFBP1Q8NEF9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 AC211486.1-202ENST00000416371 468 ntBASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 AC211476.1-201ENST00000503899 468 ntBASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SRFBP1Q8NEF9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 UXT-AS1-201ENST00000590504 1525 ntBASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms