Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 AL354989.2-201ENST00000435838 1540 ntBASIC22.52■■□□□ 1.2
UBR1Q8IWV7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
UBR1Q8IWV7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 AC079178.1-201ENST00000420915 656 ntBASIC22.51■■□□□ 1.19
UBR1Q8IWV7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 AC044849.1-201ENST00000519737 1188 ntBASIC22.51■■□□□ 1.19
UBR1Q8IWV7 AP005019.2-201ENST00000615104 511 ntBASIC22.51■■□□□ 1.19
UBR1Q8IWV7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 RN7SL574P-201ENST00000581512 297 ntBASIC22.51■■□□□ 1.19
UBR1Q8IWV7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBR1Q8IWV7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 KRTAP19-9P-201ENST00000421795 191 ntBASIC22.5■■□□□ 1.19
UBR1Q8IWV7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBR1Q8IWV7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 RN7SL769P-201ENST00000469386 295 ntBASIC22.49■■□□□ 1.19
UBR1Q8IWV7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 RNA5SP486-201ENST00000515961 83 ntBASIC22.49■■□□□ 1.19
UBR1Q8IWV7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 AC068880.1-201ENST00000507289 2297 ntBASIC22.49■■□□□ 1.19
UBR1Q8IWV7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC22.49■■□□□ 1.19
UBR1Q8IWV7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 MPRIPP1-201ENST00000452433 1089 ntBASIC22.48■■□□□ 1.19
UBR1Q8IWV7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 SERPINA13P-202ENST00000478994 924 ntBASIC22.48■■□□□ 1.19
UBR1Q8IWV7 FTLP10-202ENST00000505798 471 ntBASIC22.48■■□□□ 1.19
UBR1Q8IWV7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms