Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 MYCLP2-201ENST00000449268 967 ntBASIC20.33■□□□□ 0.85
COPS6Q7L5N1 INE1-201ENST00000456273 945 ntBASIC20.33■□□□□ 0.85
COPS6Q7L5N1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.33■□□□□ 0.85
COPS6Q7L5N1 CTBP2P3-201ENST00000585629 1255 ntBASIC20.33■□□□□ 0.85
COPS6Q7L5N1 AC099568.2-201ENST00000609194 695 ntBASIC20.33■□□□□ 0.85
COPS6Q7L5N1 IGHV3-72-202ENST00000621503 303 ntBASIC20.33■□□□□ 0.85
COPS6Q7L5N1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPS6Q7L5N1 AC134407.2-201ENST00000625089 1978 ntBASIC20.33■□□□□ 0.84
COPS6Q7L5N1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
COPS6Q7L5N1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPS6Q7L5N1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
COPS6Q7L5N1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COPS6Q7L5N1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPS6Q7L5N1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPS6Q7L5N1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
COPS6Q7L5N1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.33■□□□□ 0.84
COPS6Q7L5N1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
COPS6Q7L5N1 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.32■□□□□ 0.84
COPS6Q7L5N1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 AP006294.1-201ENST00000415407 339 ntBASIC20.32■□□□□ 0.84
COPS6Q7L5N1 AC074338.1-201ENST00000416825 156 ntBASIC20.32■□□□□ 0.84
COPS6Q7L5N1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 KRT17P7-201ENST00000451704 1104 ntBASIC20.32■□□□□ 0.84
COPS6Q7L5N1 ELK1P1-201ENST00000485699 580 ntBASIC20.32■□□□□ 0.84
COPS6Q7L5N1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 AC123567.1-201ENST00000548294 1261 ntBASIC20.32■□□□□ 0.84
COPS6Q7L5N1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 MIR8072-201ENST00000614241 80 ntBASIC20.32■□□□□ 0.84
COPS6Q7L5N1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS6Q7L5N1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.31■□□□□ 0.84
COPS6Q7L5N1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 RN7SL752P-201ENST00000463779 287 ntBASIC20.31■□□□□ 0.84
COPS6Q7L5N1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 AC132938.2-201ENST00000579188 680 ntBASIC20.31■□□□□ 0.84
COPS6Q7L5N1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 AL591163.1-201ENST00000641757 987 ntBASIC20.31■□□□□ 0.84
COPS6Q7L5N1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.31■□□□□ 0.84
COPS6Q7L5N1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms