Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 AC007551.1-201ENST00000457394 519 ntBASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 AC093433.1-201ENST00000458048 571 ntBASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 GPX4-206ENST00000588919 803 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 DRD5P1-201ENST00000456605 1438 ntBASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 ALOX12P2-203ENST00000570921 1945 ntBASIC23.77■■□□□ 1.4
CCDC141Q6ZP82 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 AC026954.1-201ENST00000429771 1293 ntBASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 HADH-212ENST00000638621 741 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC141Q6ZP82 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 YBX1P6-201ENST00000442962 1002 ntBASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 FAM86HP-204ENST00000513466 959 ntBASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 CD74-212ENST00000524315 584 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 GPR182-203ENST00000622922 591 ntBASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 ZNF767P-206ENST00000513792 565 ntBASIC23.75■■□□□ 1.39
CCDC141Q6ZP82 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 AMT-233ENST00000636522 1620 ntTSL 2 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 AL133267.1-201ENST00000398220 340 ntBASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 AC016694.1-201ENST00000434179 700 ntBASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 AC079316.1-201ENST00000548397 411 ntBASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 IFT20-206ENST00000578122 834 ntTSL 2 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 IFT20-208ENST00000578985 831 ntTSL 3 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms