Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 AC069224.1-201ENST00000566372 1715 ntBASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 RPS2P28-201ENST00000314255 741 ntBASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 AL160237.2-201ENST00000556165 472 ntBASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 MIR4515-201ENST00000584082 81 ntBASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 AC021097.1-201ENST00000607902 574 ntBASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 AC012313.10-201ENST00000623509 926 ntBASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 AP002414.3-201ENST00000589352 1468 ntBASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SMARCD3Q6STE5 U82695.1-201ENST00000635752 1889 ntBASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 FAM185BP-201ENST00000443595 716 ntBASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 FAM197Y8-203ENST00000450145 560 ntBASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 AC108073.2-201ENST00000464002 357 ntBASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 AF186996.4-201ENST00000467186 377 ntBASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 OR7E47P-204ENST00000575924 449 ntBASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 ACTL9-202ENST00000612068 1252 ntBASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms