Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 AC018712.1-201ENST00000455767 687 ntBASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 AC105339.3-201ENST00000560043 636 ntBASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 AC104692.2-201ENST00000603054 253 ntBASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 AC008735.5-201ENST00000623544 497 ntBASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM53Q6P2H8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 AC124947.2-201ENST00000547118 1133 ntBASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 PGM5P2-202ENST00000637225 1043 ntBASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM53Q6P2H8 AC009090.5-201ENST00000624886 2285 ntBASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 FLJ16779-201ENST00000612722 7638 ntBASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms