Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 FO393414.2-201ENST00000405153 598 ntBASIC17.12■□□□□ 0.33
VARS2Q5ST30 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 ARSEP1-201ENST00000420443 635 ntBASIC17.12■□□□□ 0.33
VARS2Q5ST30 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 KRT17P7-201ENST00000451704 1104 ntBASIC17.12■□□□□ 0.33
VARS2Q5ST30 AC245100.5-201ENST00000452108 331 ntBASIC17.12■□□□□ 0.33
VARS2Q5ST30 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 HMGB3P14-201ENST00000494195 599 ntBASIC17.12■□□□□ 0.33
VARS2Q5ST30 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 AL391825.1-201ENST00000457671 1364 ntBASIC17.12■□□□□ 0.33
VARS2Q5ST30 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 AL691432.1-201ENST00000596308 1422 ntBASIC17.12■□□□□ 0.33
VARS2Q5ST30 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARS2Q5ST30 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VARS2Q5ST30 ME2P1-201ENST00000426028 1970 ntBASIC17.11■□□□□ 0.33
VARS2Q5ST30 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 AGGF1P2-201ENST00000426656 2106 ntBASIC17.11■□□□□ 0.33
VARS2Q5ST30 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 AL132657.2-201ENST00000564417 358 ntBASIC17.11■□□□□ 0.33
VARS2Q5ST30 AC025048.3-201ENST00000590609 569 ntBASIC17.11■□□□□ 0.33
VARS2Q5ST30 AL451064.1-201ENST00000607718 471 ntBASIC17.11■□□□□ 0.33
VARS2Q5ST30 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 AC005702.4-201ENST00000618393 416 ntBASIC17.11■□□□□ 0.33
VARS2Q5ST30 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 OR6D1P-203ENST00000641209 4860 ntBASIC17.11■□□□□ 0.33
VARS2Q5ST30 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
VARS2Q5ST30 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARS2Q5ST30 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms