Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AC140878.1-201ENST00000565277 250 ntBASIC21.01■□□□□ 0.95
CCDC27Q2M243 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 AP005117.1-202ENST00000581724 1908 ntBASIC21.01■□□□□ 0.95
CCDC27Q2M243 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.01■□□□□ 0.95
CCDC27Q2M243 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC21■□□□□ 0.95
CCDC27Q2M243 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21■□□□□ 0.95
CCDC27Q2M243 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21■□□□□ 0.95
CCDC27Q2M243 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CCDC27Q2M243 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21■□□□□ 0.95
CCDC27Q2M243 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21■□□□□ 0.95
CCDC27Q2M243 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21■□□□□ 0.95
CCDC27Q2M243 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21■□□□□ 0.95
CCDC27Q2M243 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21■□□□□ 0.95
CCDC27Q2M243 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCDC27Q2M243 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC27Q2M243 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC21■□□□□ 0.95
CCDC27Q2M243 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC27Q2M243 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC27Q2M243 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC27Q2M243 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC27Q2M243 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC27Q2M243 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC27Q2M243 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC27Q2M243 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC27Q2M243 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC27Q2M243 RPL37AP1-201ENST00000412502 279 ntBASIC20.98■□□□□ 0.95
CCDC27Q2M243 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC27Q2M243 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 AL158211.3-201ENST00000607385 239 ntBASIC20.98■□□□□ 0.95
CCDC27Q2M243 SPDYE12P-201ENST00000618416 771 ntBASIC20.98■□□□□ 0.95
CCDC27Q2M243 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms