Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.9■□□□□ 0.62
IRX3P78415 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.9■□□□□ 0.62
IRX3P78415 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.9■□□□□ 0.62
IRX3P78415 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
IRX3P78415 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
IRX3P78415 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.89■□□□□ 0.62
IRX3P78415 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
IRX3P78415 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.89■□□□□ 0.62
IRX3P78415 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.89■□□□□ 0.62
IRX3P78415 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX3P78415 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX3P78415 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX3P78415 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX3P78415 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 HLA-V-201ENST00000429037 534 ntBASIC18.89■□□□□ 0.61
IRX3P78415 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IRX3P78415 AC114501.2-201ENST00000439631 535 ntBASIC18.89■□□□□ 0.61
IRX3P78415 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
IRX3P78415 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.89■□□□□ 0.61
IRX3P78415 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX3P78415 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IRX3P78415 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.89■□□□□ 0.61
IRX3P78415 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
IRX3P78415 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.89■□□□□ 0.61
IRX3P78415 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.89■□□□□ 0.61
IRX3P78415 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.89■□□□□ 0.61
IRX3P78415 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IRX3P78415 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
IRX3P78415 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 KRT8P12-202ENST00000472924 1397 ntBASIC18.89■□□□□ 0.61
IRX3P78415 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IRX3P78415 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX3P78415 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
IRX3P78415 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.88■□□□□ 0.61
IRX3P78415 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.88■□□□□ 0.61
IRX3P78415 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
IRX3P78415 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.88■□□□□ 0.61
IRX3P78415 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
IRX3P78415 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
IRX3P78415 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 OR6D1P-203ENST00000641209 4860 ntBASIC18.88■□□□□ 0.61
IRX3P78415 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
IRX3P78415 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.88■□□□□ 0.61
IRX3P78415 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.88■□□□□ 0.61
IRX3P78415 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
IRX3P78415 AC055876.2-201ENST00000531834 546 ntBASIC18.88■□□□□ 0.61
IRX3P78415 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.88■□□□□ 0.61
IRX3P78415 AC132938.2-201ENST00000579188 680 ntBASIC18.88■□□□□ 0.61
IRX3P78415 AC061975.2-201ENST00000581722 295 ntBASIC18.88■□□□□ 0.61
IRX3P78415 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.88■□□□□ 0.61
IRX3P78415 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.88■□□□□ 0.61
IRX3P78415 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.88■□□□□ 0.61
IRX3P78415 AL591163.1-201ENST00000641757 987 ntBASIC18.88■□□□□ 0.61
IRX3P78415 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.88■□□□□ 0.61
IRX3P78415 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
IRX3P78415 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.88■□□□□ 0.61
IRX3P78415 AL512652.2-201ENST00000625156 1716 ntBASIC18.88■□□□□ 0.61
IRX3P78415 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX3P78415 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.88■□□□□ 0.61
IRX3P78415 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
IRX3P78415 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms