Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH4P55283 AC011467.4-201ENST00000594891 528 ntBASIC16.53■□□□□ 0.24
CDH4P55283 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH4P55283 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH4P55283 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH4P55283 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.53■□□□□ 0.24
CDH4P55283 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH4P55283 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CDH4P55283 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH4P55283 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH4P55283 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH4P55283 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH4P55283 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CDH4P55283 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH4P55283 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH4P55283 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH4P55283 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH4P55283 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH4P55283 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
CDH4P55283 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH4P55283 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH4P55283 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH4P55283 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.52■□□□□ 0.24
CDH4P55283 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH4P55283 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH4P55283 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.52■□□□□ 0.24
CDH4P55283 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH4P55283 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH4P55283 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH4P55283 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
CDH4P55283 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH4P55283 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.52■□□□□ 0.23
CDH4P55283 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH4P55283 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.52■□□□□ 0.23
CDH4P55283 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CDH4P55283 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH4P55283 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH4P55283 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH4P55283 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.52■□□□□ 0.23
CDH4P55283 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH4P55283 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH4P55283 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH4P55283 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH4P55283 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.51■□□□□ 0.23
CDH4P55283 AC087499.5-201ENST00000452760 1342 ntBASIC16.51■□□□□ 0.23
CDH4P55283 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH4P55283 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH4P55283 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.51■□□□□ 0.23
CDH4P55283 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CDH4P55283 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.51■□□□□ 0.23
CDH4P55283 AL512638.1-201ENST00000457493 794 ntBASIC16.51■□□□□ 0.23
CDH4P55283 SERBP1P3-201ENST00000459980 809 ntBASIC16.51■□□□□ 0.23
CDH4P55283 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH4P55283 SPCS2P1-201ENST00000561636 679 ntBASIC16.51■□□□□ 0.23
CDH4P55283 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.51■□□□□ 0.23
CDH4P55283 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH4P55283 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDH4P55283 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH4P55283 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH4P55283 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms