Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NUP98P52948 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NUP98P52948 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NUP98P52948 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.84■□□□□ 0.77
NUP98P52948 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NUP98P52948 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.84■□□□□ 0.77
NUP98P52948 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.84■□□□□ 0.77
NUP98P52948 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.84■□□□□ 0.77
NUP98P52948 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.84■□□□□ 0.77
NUP98P52948 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.84■□□□□ 0.77
NUP98P52948 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.84■□□□□ 0.77
NUP98P52948 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP98P52948 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.84■□□□□ 0.77
NUP98P52948 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.84■□□□□ 0.77
NUP98P52948 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
NUP98P52948 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NUP98P52948 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUP98P52948 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUP98P52948 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUP98P52948 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NUP98P52948 C1QBPP1-201ENST00000400117 770 ntBASIC19.83■□□□□ 0.77
NUP98P52948 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NUP98P52948 AC093433.1-201ENST00000458048 571 ntBASIC19.83■□□□□ 0.77
NUP98P52948 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
NUP98P52948 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUP98P52948 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.83■□□□□ 0.77
NUP98P52948 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.83■□□□□ 0.77
NUP98P52948 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.83■□□□□ 0.77
NUP98P52948 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.83■□□□□ 0.77
NUP98P52948 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NUP98P52948 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUP98P52948 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUP98P52948 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NUP98P52948 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUP98P52948 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUP98P52948 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.83■□□□□ 0.76
NUP98P52948 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.83■□□□□ 0.76
NUP98P52948 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.83■□□□□ 0.76
NUP98P52948 BCRP2-202ENST00000447763 634 ntBASIC19.83■□□□□ 0.76
NUP98P52948 KLF2P4-201ENST00000451959 1225 ntBASIC19.83■□□□□ 0.76
NUP98P52948 BCRP6-201ENST00000510112 632 ntBASIC19.83■□□□□ 0.76
NUP98P52948 BCRP7-201ENST00000511549 544 ntBASIC19.83■□□□□ 0.76
NUP98P52948 DUX4L45-201ENST00000566406 1057 ntBASIC19.83■□□□□ 0.76
NUP98P52948 CLUHP6-201ENST00000580789 941 ntBASIC19.83■□□□□ 0.76
NUP98P52948 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.83■□□□□ 0.76
NUP98P52948 BTNL10-201ENST00000595971 695 ntBASIC19.83■□□□□ 0.76
NUP98P52948 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.83■□□□□ 0.76
NUP98P52948 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUP98P52948 MIR6799-201ENST00000620297 69 ntBASIC19.83■□□□□ 0.76
NUP98P52948 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.83■□□□□ 0.76
NUP98P52948 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUP98P52948 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.83■□□□□ 0.76
NUP98P52948 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NUP98P52948 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
NUP98P52948 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NUP98P52948 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.83■□□□□ 0.76
NUP98P52948 AC093525.8-201ENST00000624099 1342 ntBASIC19.83■□□□□ 0.76
NUP98P52948 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NUP98P52948 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NUP98P52948 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 RNU1-114P-201ENST00000365297 166 ntBASIC19.82■□□□□ 0.76
NUP98P52948 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.82■□□□□ 0.76
NUP98P52948 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 MIR1908-201ENST00000410394 80 ntBASIC19.82■□□□□ 0.76
NUP98P52948 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.82■□□□□ 0.76
NUP98P52948 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.82■□□□□ 0.76
NUP98P52948 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.82■□□□□ 0.76
NUP98P52948 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.82■□□□□ 0.76
NUP98P52948 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.82■□□□□ 0.76
NUP98P52948 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 AC009542.2-202ENST00000619004 1067 ntBASIC19.82■□□□□ 0.76
NUP98P52948 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NUP98P52948 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
NUP98P52948 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NUP98P52948 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NUP98P52948 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NUP98P52948 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.82■□□□□ 0.76
NUP98P52948 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
NUP98P52948 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUP98P52948 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms