Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19■□□□□ 0.63
MRE11P49959 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC19■□□□□ 0.63
MRE11P49959 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19■□□□□ 0.63
MRE11P49959 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19■□□□□ 0.63
MRE11P49959 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19■□□□□ 0.63
MRE11P49959 CICP23-201ENST00000605013 2741 ntBASIC19■□□□□ 0.63
MRE11P49959 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19■□□□□ 0.63
MRE11P49959 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MRE11P49959 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19■□□□□ 0.63
MRE11P49959 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MRE11P49959 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19■□□□□ 0.63
MRE11P49959 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19■□□□□ 0.63
MRE11P49959 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19■□□□□ 0.63
MRE11P49959 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19■□□□□ 0.63
MRE11P49959 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19■□□□□ 0.63
MRE11P49959 AL157888.1-201ENST00000631930 593 ntBASIC19■□□□□ 0.63
MRE11P49959 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19■□□□□ 0.63
MRE11P49959 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MRE11P49959 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19■□□□□ 0.63
MRE11P49959 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
MRE11P49959 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MRE11P49959 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
MRE11P49959 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19■□□□□ 0.63
MRE11P49959 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19■□□□□ 0.63
MRE11P49959 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19■□□□□ 0.63
MRE11P49959 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRE11P49959 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
MRE11P49959 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MRE11P49959 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MRE11P49959 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
MRE11P49959 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.99■□□□□ 0.63
MRE11P49959 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.99■□□□□ 0.63
MRE11P49959 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.99■□□□□ 0.63
MRE11P49959 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.99■□□□□ 0.63
MRE11P49959 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.99■□□□□ 0.63
MRE11P49959 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.99■□□□□ 0.63
MRE11P49959 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.99■□□□□ 0.63
MRE11P49959 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.99■□□□□ 0.63
MRE11P49959 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
MRE11P49959 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.99■□□□□ 0.63
MRE11P49959 AC148477.8-201ENST00000624298 468 ntBASIC18.99■□□□□ 0.63
MRE11P49959 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MRE11P49959 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.99■□□□□ 0.63
MRE11P49959 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
MRE11P49959 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MRE11P49959 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.98■□□□□ 0.63
MRE11P49959 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.98■□□□□ 0.63
MRE11P49959 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.98■□□□□ 0.63
MRE11P49959 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.98■□□□□ 0.63
MRE11P49959 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.98■□□□□ 0.63
MRE11P49959 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC18.98■□□□□ 0.63
MRE11P49959 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
MRE11P49959 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 AL021920.2-201ENST00000624828 1351 ntBASIC18.98■□□□□ 0.63
MRE11P49959 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MRE11P49959 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.98■□□□□ 0.63
MRE11P49959 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MRE11P49959 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms