Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TM4SF4P48230 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TM4SF4P48230 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.17■□□□□ 0.5
TM4SF4P48230 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TM4SF4P48230 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TM4SF4P48230 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.17■□□□□ 0.5
TM4SF4P48230 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TM4SF4P48230 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF4P48230 AC134043.2-201ENST00000624206 2238 ntBASIC18.17■□□□□ 0.5
TM4SF4P48230 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF4P48230 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.16■□□□□ 0.5
TM4SF4P48230 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.16■□□□□ 0.5
TM4SF4P48230 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF4P48230 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF4P48230 GGT3P-204ENST00000453783 1664 ntBASIC18.16■□□□□ 0.5
TM4SF4P48230 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF4P48230 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF4P48230 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF4P48230 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF4P48230 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TM4SF4P48230 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.16■□□□□ 0.5
TM4SF4P48230 AL590640.2-201ENST00000457038 527 ntBASIC18.16■□□□□ 0.5
TM4SF4P48230 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.16■□□□□ 0.5
TM4SF4P48230 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TM4SF4P48230 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.16■□□□□ 0.5
TM4SF4P48230 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.16■□□□□ 0.5
TM4SF4P48230 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TM4SF4P48230 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF4P48230 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF4P48230 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF4P48230 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TM4SF4P48230 AL603756.1-201ENST00000606511 2163 ntBASIC18.15■□□□□ 0.5
TM4SF4P48230 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TM4SF4P48230 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
TM4SF4P48230 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
TM4SF4P48230 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 AL592424.1-201ENST00000563624 1536 ntBASIC18.15■□□□□ 0.5
TM4SF4P48230 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.15■□□□□ 0.5
TM4SF4P48230 CNN2P10-201ENST00000443067 918 ntBASIC18.15■□□□□ 0.5
TM4SF4P48230 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.15■□□□□ 0.5
TM4SF4P48230 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.15■□□□□ 0.5
TM4SF4P48230 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TM4SF4P48230 KRT8P35-201ENST00000483942 1338 ntBASIC18.15■□□□□ 0.5
TM4SF4P48230 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TM4SF4P48230 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF4P48230 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.15■□□□□ 0.5
TM4SF4P48230 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TM4SF4P48230 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.14■□□□□ 0.49
TM4SF4P48230 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TM4SF4P48230 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TM4SF4P48230 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.14■□□□□ 0.49
TM4SF4P48230 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.14■□□□□ 0.49
TM4SF4P48230 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 FTLP10-202ENST00000505798 471 ntBASIC18.14■□□□□ 0.49
TM4SF4P48230 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TM4SF4P48230 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TM4SF4P48230 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.14■□□□□ 0.49
TM4SF4P48230 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 AC138649.2-201ENST00000615886 705 ntBASIC18.14■□□□□ 0.49
TM4SF4P48230 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.14■□□□□ 0.49
TM4SF4P48230 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
TM4SF4P48230 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.14■□□□□ 0.49
TM4SF4P48230 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.14■□□□□ 0.49
TM4SF4P48230 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.14■□□□□ 0.49
TM4SF4P48230 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.14■□□□□ 0.49
TM4SF4P48230 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.14■□□□□ 0.49
TM4SF4P48230 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TM4SF4P48230 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF4P48230 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.14■□□□□ 0.49
TM4SF4P48230 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.14■□□□□ 0.49
TM4SF4P48230 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TM4SF4P48230 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.13■□□□□ 0.49
TM4SF4P48230 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF4P48230 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms