Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AL627223.1-201ENST00000416693 442 ntBASIC18.32■□□□□ 0.52
PRPHP41219 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.32■□□□□ 0.52
PRPHP41219 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.32■□□□□ 0.52
PRPHP41219 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.32■□□□□ 0.52
PRPHP41219 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.32■□□□□ 0.52
PRPHP41219 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.32■□□□□ 0.52
PRPHP41219 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
PRPHP41219 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.32■□□□□ 0.52
PRPHP41219 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.32■□□□□ 0.52
PRPHP41219 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PRPHP41219 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.32■□□□□ 0.52
PRPHP41219 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
PRPHP41219 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPHP41219 AC010491.1-201ENST00000563101 2797 ntBASIC18.31■□□□□ 0.52
PRPHP41219 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPHP41219 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PRPHP41219 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
PRPHP41219 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPHP41219 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRPHP41219 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRPHP41219 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
PRPHP41219 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRPHP41219 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.31■□□□□ 0.52
PRPHP41219 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.31■□□□□ 0.52
PRPHP41219 RNA5SP410-201ENST00000516285 106 ntBASIC18.31■□□□□ 0.52
PRPHP41219 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.31■□□□□ 0.52
PRPHP41219 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.31■□□□□ 0.52
PRPHP41219 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPHP41219 AC092865.5-201ENST00000545435 363 ntBASIC18.31■□□□□ 0.52
PRPHP41219 AC093520.2-201ENST00000561830 333 ntBASIC18.31■□□□□ 0.52
PRPHP41219 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
PRPHP41219 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.31■□□□□ 0.52
PRPHP41219 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.31■□□□□ 0.52
PRPHP41219 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.31■□□□□ 0.52
PRPHP41219 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPHP41219 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.31■□□□□ 0.52
PRPHP41219 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.31■□□□□ 0.52
PRPHP41219 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPHP41219 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPHP41219 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRPHP41219 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PRPHP41219 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PRPHP41219 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPHP41219 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.31■□□□□ 0.52
PRPHP41219 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 AP3S2-216ENST00000617003 1561 ntBASIC18.3■□□□□ 0.52
PRPHP41219 AC008894.3-201ENST00000624324 3103 ntBASIC18.3■□□□□ 0.52
PRPHP41219 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PRPHP41219 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PRPHP41219 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PRPHP41219 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.3■□□□□ 0.52
PRPHP41219 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.3■□□□□ 0.52
PRPHP41219 AC005237.2-201ENST00000434368 219 ntBASIC18.3■□□□□ 0.52
PRPHP41219 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.3■□□□□ 0.52
PRPHP41219 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.3■□□□□ 0.52
PRPHP41219 AP006288.1-201ENST00000446065 395 ntBASIC18.3■□□□□ 0.52
PRPHP41219 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
PRPHP41219 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.3■□□□□ 0.52
PRPHP41219 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.3■□□□□ 0.52
PRPHP41219 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.3■□□□□ 0.52
PRPHP41219 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.3■□□□□ 0.52
PRPHP41219 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.3■□□□□ 0.52
PRPHP41219 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPHP41219 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.3■□□□□ 0.52
PRPHP41219 AC011477.6-201ENST00000604980 1927 ntBASIC18.29■□□□□ 0.52
PRPHP41219 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPHP41219 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPHP41219 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPHP41219 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPHP41219 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPHP41219 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRPHP41219 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRPHP41219 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.29■□□□□ 0.52
PRPHP41219 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms