Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.12■□□□□ 0.33
RFC1P35251 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFC1P35251 FOXO1B-201ENST00000504678 1527 ntBASIC17.12■□□□□ 0.33
RFC1P35251 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RFC1P35251 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RFC1P35251 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RFC1P35251 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 HTR5BP-201ENST00000430851 1154 ntBASIC17.12■□□□□ 0.33
RFC1P35251 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 KRT8P48-201ENST00000515599 1220 ntBASIC17.12■□□□□ 0.33
RFC1P35251 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.12■□□□□ 0.33
RFC1P35251 FAM86C2P-203ENST00000528684 1004 ntBASIC17.12■□□□□ 0.33
RFC1P35251 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 AC073389.1-201ENST00000595595 795 ntBASIC17.12■□□□□ 0.33
RFC1P35251 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.12■□□□□ 0.33
RFC1P35251 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
RFC1P35251 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC1P35251 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC1P35251 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 AC046158.3-201ENST00000624947 2558 ntBASIC17.11■□□□□ 0.33
RFC1P35251 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 CDC14C-201ENST00000428251 1719 ntBASIC17.11■□□□□ 0.33
RFC1P35251 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RFC1P35251 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.11■□□□□ 0.33
RFC1P35251 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.11■□□□□ 0.33
RFC1P35251 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 MKNK2P1-201ENST00000437526 628 ntBASIC17.11■□□□□ 0.33
RFC1P35251 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.11■□□□□ 0.33
RFC1P35251 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
RFC1P35251 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.11■□□□□ 0.33
RFC1P35251 AC027307.2-201ENST00000591252 911 ntBASIC17.11■□□□□ 0.33
RFC1P35251 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 AC026120.1-201ENST00000611536 926 ntBASIC17.11■□□□□ 0.33
RFC1P35251 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.11■□□□□ 0.33
RFC1P35251 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.11■□□□□ 0.33
RFC1P35251 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.11■□□□□ 0.33
RFC1P35251 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RFC1P35251 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.11■□□□□ 0.33
RFC1P35251 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RFC1P35251 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC1P35251 AC132872.4-202ENST00000622924 2756 ntBASIC17.11■□□□□ 0.33
RFC1P35251 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RFC1P35251 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.11■□□□□ 0.33
RFC1P35251 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RFC1P35251 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 PAUPAR-201ENST00000630360 2965 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms