Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD40LGP29965 LINC01144-201ENST00000626198 1710 ntBASIC14.46□□□□□ -0.1
CD40LGP29965 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD40LGP29965 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.46□□□□□ -0.1
CD40LGP29965 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD40LGP29965 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD40LGP29965 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.46□□□□□ -0.1
CD40LGP29965 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD40LGP29965 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD40LGP29965 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CD40LGP29965 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.45□□□□□ -0.1
CD40LGP29965 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD40LGP29965 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD40LGP29965 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
CD40LGP29965 OR2I1P-209ENST00000641730 5365 ntBASIC14.45□□□□□ -0.1
CD40LGP29965 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40LGP29965 AGAP7P-201ENST00000582299 2062 ntBASIC14.45□□□□□ -0.1
CD40LGP29965 AGAP14-201ENST00000624701 2060 ntBASIC14.45□□□□□ -0.1
CD40LGP29965 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.45□□□□□ -0.1
CD40LGP29965 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 CICP20-201ENST00000443330 2801 ntBASIC14.45□□□□□ -0.1
CD40LGP29965 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.45□□□□□ -0.1
CD40LGP29965 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40LGP29965 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.45□□□□□ -0.1
CD40LGP29965 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.45□□□□□ -0.1
CD40LGP29965 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.45□□□□□ -0.1
CD40LGP29965 TSPY5P-201ENST00000426936 936 ntBASIC14.45□□□□□ -0.1
CD40LGP29965 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.45□□□□□ -0.1
CD40LGP29965 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.45□□□□□ -0.1
CD40LGP29965 SBF1P1-201ENST00000444527 5631 ntBASIC14.45□□□□□ -0.1
CD40LGP29965 MTCL1P1-201ENST00000446207 792 ntBASIC14.45□□□□□ -0.1
CD40LGP29965 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 YBX1P2-201ENST00000489612 999 ntBASIC14.45□□□□□ -0.1
CD40LGP29965 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.45□□□□□ -0.1
CD40LGP29965 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.45□□□□□ -0.1
CD40LGP29965 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CD40LGP29965 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.45□□□□□ -0.1
CD40LGP29965 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40LGP29965 AC139887.4-201ENST00000607877 719 ntBASIC14.45□□□□□ -0.1
CD40LGP29965 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD40LGP29965 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.45□□□□□ -0.1
CD40LGP29965 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40LGP29965 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40LGP29965 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CD40LGP29965 FGD5P1-202ENST00000614866 2498 ntBASIC14.44□□□□□ -0.1
CD40LGP29965 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.44□□□□□ -0.1
CD40LGP29965 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.44□□□□□ -0.1
CD40LGP29965 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.44□□□□□ -0.1
CD40LGP29965 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.44□□□□□ -0.1
CD40LGP29965 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CD40LGP29965 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CD40LGP29965 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.44□□□□□ -0.1
CD40LGP29965 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.44□□□□□ -0.1
CD40LGP29965 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 AL023973.1-201ENST00000624619 620 ntBASIC14.44□□□□□ -0.1
CD40LGP29965 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CD40LGP29965 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.44□□□□□ -0.1
CD40LGP29965 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms