Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.38□□□□□ -0.11
MSR1P21757 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.38□□□□□ -0.11
MSR1P21757 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.38□□□□□ -0.11
MSR1P21757 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.38□□□□□ -0.11
MSR1P21757 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
MSR1P21757 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.38□□□□□ -0.11
MSR1P21757 AL603832.2-201ENST00000566195 2125 ntBASIC14.38□□□□□ -0.11
MSR1P21757 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.38□□□□□ -0.11
MSR1P21757 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 LINC02199-201ENST00000506655 2702 ntBASIC14.37□□□□□ -0.11
MSR1P21757 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MSR1P21757 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
MSR1P21757 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.37□□□□□ -0.11
MSR1P21757 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
MSR1P21757 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.37□□□□□ -0.11
MSR1P21757 MCCD1P2-201ENST00000423228 335 ntBASIC14.37□□□□□ -0.11
MSR1P21757 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.37□□□□□ -0.11
MSR1P21757 FAM86C2P-203ENST00000528684 1004 ntBASIC14.37□□□□□ -0.11
MSR1P21757 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.37□□□□□ -0.11
MSR1P21757 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.37□□□□□ -0.11
MSR1P21757 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.37□□□□□ -0.11
MSR1P21757 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.37□□□□□ -0.11
MSR1P21757 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.37□□□□□ -0.11
MSR1P21757 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MSR1P21757 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.37□□□□□ -0.11
MSR1P21757 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.37□□□□□ -0.11
MSR1P21757 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.36□□□□□ -0.11
MSR1P21757 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.36□□□□□ -0.11
MSR1P21757 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 AL589702.1-201ENST00000641229 1509 ntBASIC14.36□□□□□ -0.11
MSR1P21757 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MSR1P21757 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.36□□□□□ -0.11
MSR1P21757 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
MSR1P21757 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
MSR1P21757 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MSR1P21757 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
MSR1P21757 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
MSR1P21757 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.36□□□□□ -0.11
MSR1P21757 AC004832.2-201ENST00000426397 482 ntBASIC14.36□□□□□ -0.11
MSR1P21757 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.36□□□□□ -0.11
MSR1P21757 AL671277.1-201ENST00000429656 993 ntBASIC14.36□□□□□ -0.11
MSR1P21757 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.36□□□□□ -0.11
MSR1P21757 RN7SL589P-201ENST00000481268 310 ntBASIC14.36□□□□□ -0.11
MSR1P21757 PGAM5P1-201ENST00000518923 814 ntBASIC14.36□□□□□ -0.11
MSR1P21757 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.36□□□□□ -0.11
MSR1P21757 AL135744.1-201ENST00000565098 629 ntBASIC14.36□□□□□ -0.11
MSR1P21757 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.36□□□□□ -0.11
MSR1P21757 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.36□□□□□ -0.11
MSR1P21757 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 AL365203.3-201ENST00000609742 2057 ntBASIC14.36□□□□□ -0.11
MSR1P21757 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.36□□□□□ -0.11
MSR1P21757 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.36□□□□□ -0.11
MSR1P21757 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
MSR1P21757 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
MSR1P21757 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.36□□□□□ -0.11
MSR1P21757 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms