Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ATF7P17544 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ATF7P17544 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.81■□□□□ 0.44
ATF7P17544 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.81■□□□□ 0.44
ATF7P17544 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 RPL37AP1-201ENST00000412502 279 ntBASIC17.81■□□□□ 0.44
ATF7P17544 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 AC093724.1-201ENST00000448659 1027 ntBASIC17.81■□□□□ 0.44
ATF7P17544 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 RNA5SP410-201ENST00000516285 106 ntBASIC17.81■□□□□ 0.44
ATF7P17544 AC009407.1-201ENST00000568958 598 ntBASIC17.81■□□□□ 0.44
ATF7P17544 AC105021.1-202ENST00000570572 669 ntBASIC17.81■□□□□ 0.44
ATF7P17544 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
ATF7P17544 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.81■□□□□ 0.44
ATF7P17544 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.81■□□□□ 0.44
ATF7P17544 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ATF7P17544 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATF7P17544 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.81■□□□□ 0.44
ATF7P17544 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF7P17544 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ATF7P17544 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ATF7P17544 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF7P17544 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF7P17544 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 NME2P1-201ENST00000426182 414 ntBASIC17.8■□□□□ 0.44
ATF7P17544 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF7P17544 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ATF7P17544 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATF7P17544 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.8■□□□□ 0.44
ATF7P17544 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.8■□□□□ 0.44
ATF7P17544 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.8■□□□□ 0.44
ATF7P17544 SPDYE22P-201ENST00000582158 798 ntBASIC17.8■□□□□ 0.44
ATF7P17544 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.8■□□□□ 0.44
ATF7P17544 AC025048.6-201ENST00000634326 1161 ntBASIC17.8■□□□□ 0.44
ATF7P17544 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.8■□□□□ 0.44
ATF7P17544 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
ATF7P17544 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.8■□□□□ 0.44
ATF7P17544 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATF7P17544 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ATF7P17544 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF7P17544 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 AL031731.1-201ENST00000642131 2094 ntBASIC17.79■□□□□ 0.44
ATF7P17544 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
ATF7P17544 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATF7P17544 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.79■□□□□ 0.44
ATF7P17544 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
ATF7P17544 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
ATF7P17544 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 GGT4P-201ENST00000623672 1708 ntBASIC17.79■□□□□ 0.44
ATF7P17544 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 PIN1P1-201ENST00000412108 996 ntBASIC17.79■□□□□ 0.44
ATF7P17544 AL080243.2-201ENST00000418783 582 ntBASIC17.79■□□□□ 0.44
ATF7P17544 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.79■□□□□ 0.44
ATF7P17544 MTND6P24-201ENST00000440466 518 ntBASIC17.79■□□□□ 0.44
ATF7P17544 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.79■□□□□ 0.44
ATF7P17544 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.79■□□□□ 0.44
ATF7P17544 AC008738.7-201ENST00000609744 511 ntBASIC17.79■□□□□ 0.44
ATF7P17544 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.79■□□□□ 0.44
ATF7P17544 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.79■□□□□ 0.44
ATF7P17544 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATF7P17544 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms