Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 BCAR1-209ENST00000546196 1340 ntBASIC17.31■□□□□ 0.36
FAM228BP0C875 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 KRT18P2-201ENST00000447938 1258 ntBASIC17.31■□□□□ 0.36
FAM228BP0C875 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 AC009078.2-202ENST00000463353 338 ntBASIC17.31■□□□□ 0.36
FAM228BP0C875 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
FAM228BP0C875 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
FAM228BP0C875 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.31■□□□□ 0.36
FAM228BP0C875 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 AC011477.6-201ENST00000604980 1927 ntBASIC17.31■□□□□ 0.36
FAM228BP0C875 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
FAM228BP0C875 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
FAM228BP0C875 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
FAM228BP0C875 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM228BP0C875 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM228BP0C875 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
FAM228BP0C875 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM228BP0C875 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM228BP0C875 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.3■□□□□ 0.36
FAM228BP0C875 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FAM228BP0C875 AC034105.1-201ENST00000563488 319 ntBASIC17.3■□□□□ 0.36
FAM228BP0C875 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.3■□□□□ 0.36
FAM228BP0C875 MIR4321-201ENST00000592276 80 ntBASIC17.3■□□□□ 0.36
FAM228BP0C875 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM228BP0C875 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM228BP0C875 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FAM228BP0C875 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FAM228BP0C875 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM228BP0C875 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM228BP0C875 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
FAM228BP0C875 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM228BP0C875 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FAM228BP0C875 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FAM228BP0C875 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.29■□□□□ 0.36
FAM228BP0C875 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.29■□□□□ 0.36
FAM228BP0C875 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FAM228BP0C875 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
FAM228BP0C875 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.29■□□□□ 0.36
FAM228BP0C875 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.29■□□□□ 0.36
FAM228BP0C875 AL662844.1-201ENST00000546340 181 ntBASIC17.29■□□□□ 0.36
FAM228BP0C875 KRT19P2-202ENST00000557173 1012 ntBASIC17.29■□□□□ 0.36
FAM228BP0C875 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.29■□□□□ 0.36
FAM228BP0C875 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.29■□□□□ 0.36
FAM228BP0C875 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FAM228BP0C875 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.29■□□□□ 0.36
FAM228BP0C875 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FAM228BP0C875 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.29■□□□□ 0.36
FAM228BP0C875 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM228BP0C875 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM228BP0C875 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms