Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
POLR3DP05423 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.38■□□□□ 0.69
POLR3DP05423 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
POLR3DP05423 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR3DP05423 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR3DP05423 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
POLR3DP05423 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
POLR3DP05423 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
POLR3DP05423 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR3DP05423 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.37■□□□□ 0.69
POLR3DP05423 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.37■□□□□ 0.69
POLR3DP05423 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
POLR3DP05423 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
POLR3DP05423 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
POLR3DP05423 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
POLR3DP05423 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.37■□□□□ 0.69
POLR3DP05423 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.37■□□□□ 0.69
POLR3DP05423 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR3DP05423 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.37■□□□□ 0.69
POLR3DP05423 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR3DP05423 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.37■□□□□ 0.69
POLR3DP05423 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.37■□□□□ 0.69
POLR3DP05423 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
POLR3DP05423 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
POLR3DP05423 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
POLR3DP05423 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR3DP05423 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
POLR3DP05423 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR3DP05423 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.37■□□□□ 0.69
POLR3DP05423 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
POLR3DP05423 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR3DP05423 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR3DP05423 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
POLR3DP05423 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.36■□□□□ 0.69
POLR3DP05423 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.36■□□□□ 0.69
POLR3DP05423 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR3DP05423 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR3DP05423 RPL37AP1-201ENST00000412502 279 ntBASIC19.36■□□□□ 0.69
POLR3DP05423 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.36■□□□□ 0.69
POLR3DP05423 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 TSSK5P-201ENST00000423978 907 ntBASIC19.36■□□□□ 0.69
POLR3DP05423 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 AC002472.2-201ENST00000442739 958 ntBASIC19.36■□□□□ 0.69
POLR3DP05423 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.36■□□□□ 0.69
POLR3DP05423 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.36■□□□□ 0.69
POLR3DP05423 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR3DP05423 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.36■□□□□ 0.69
POLR3DP05423 RN7SL204P-201ENST00000582831 262 ntBASIC19.36■□□□□ 0.69
POLR3DP05423 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
POLR3DP05423 AL133215.2-201ENST00000609242 977 ntBASIC19.36■□□□□ 0.69
POLR3DP05423 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
POLR3DP05423 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR3DP05423 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR3DP05423 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
POLR3DP05423 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR3DP05423 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
POLR3DP05423 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
POLR3DP05423 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
POLR3DP05423 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR3DP05423 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
POLR3DP05423 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.35■□□□□ 0.69
POLR3DP05423 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 U82695.1-201ENST00000635752 1889 ntBASIC19.35■□□□□ 0.69
POLR3DP05423 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
POLR3DP05423 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR3DP05423 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 LINC02199-201ENST00000506655 2702 ntBASIC19.35■□□□□ 0.69
POLR3DP05423 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
POLR3DP05423 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms