Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VTNP04004 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VTNP04004 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.69■□□□□ 0.42
VTNP04004 NKILA-202ENST00000614771 2598 ntBASIC17.69■□□□□ 0.42
VTNP04004 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.69■□□□□ 0.42
VTNP04004 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.69■□□□□ 0.42
VTNP04004 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.69■□□□□ 0.42
VTNP04004 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
VTNP04004 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.69■□□□□ 0.42
VTNP04004 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.69■□□□□ 0.42
VTNP04004 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.69■□□□□ 0.42
VTNP04004 DGCR5-201ENST00000399539 862 ntBASIC17.69■□□□□ 0.42
VTNP04004 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.69■□□□□ 0.42
VTNP04004 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.69■□□□□ 0.42
VTNP04004 AC093004.1-201ENST00000508850 424 ntBASIC17.69■□□□□ 0.42
VTNP04004 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.69■□□□□ 0.42
VTNP04004 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.69■□□□□ 0.42
VTNP04004 AC023310.3-201ENST00000557027 670 ntBASIC17.69■□□□□ 0.42
VTNP04004 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.69■□□□□ 0.42
VTNP04004 AC100756.1-201ENST00000562736 682 ntBASIC17.69■□□□□ 0.42
VTNP04004 WASH4P-201ENST00000564273 1246 ntBASIC17.69■□□□□ 0.42
VTNP04004 AC138749.3-201ENST00000567691 622 ntBASIC17.69■□□□□ 0.42
VTNP04004 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.69■□□□□ 0.42
VTNP04004 AC116165.1-201ENST00000611806 668 ntBASIC17.69■□□□□ 0.42
VTNP04004 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.69■□□□□ 0.42
VTNP04004 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
VTNP04004 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VTNP04004 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
VTNP04004 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
VTNP04004 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
VTNP04004 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.69■□□□□ 0.42
VTNP04004 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTNP04004 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.69■□□□□ 0.42
VTNP04004 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
VTNP04004 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
VTNP04004 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.68■□□□□ 0.42
VTNP04004 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
VTNP04004 AC004987.2-201ENST00000395959 1148 ntBASIC17.68■□□□□ 0.42
VTNP04004 FO393414.2-201ENST00000405153 598 ntBASIC17.68■□□□□ 0.42
VTNP04004 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.68■□□□□ 0.42
VTNP04004 TPRX2P-201ENST00000535362 881 ntBASIC17.68■□□□□ 0.42
VTNP04004 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.68■□□□□ 0.42
VTNP04004 AC008494.3-201ENST00000606615 944 ntBASIC17.68■□□□□ 0.42
VTNP04004 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
VTNP04004 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
VTNP04004 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.68■□□□□ 0.42
VTNP04004 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
VTNP04004 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.68■□□□□ 0.42
VTNP04004 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTNP04004 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VTNP04004 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
VTNP04004 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VTNP04004 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
VTNP04004 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VTNP04004 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.67■□□□□ 0.42
VTNP04004 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.67■□□□□ 0.42
VTNP04004 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 LTB4R2-202ENST00000528054 3092 ntBASIC17.67■□□□□ 0.42
VTNP04004 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms