Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND3P03897 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.62■□□□□ 0.25
MT-ND3P03897 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND3P03897 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MT-ND3P03897 MIR3687-2-201ENST00000577708 61 ntBASIC16.62■□□□□ 0.25
MT-ND3P03897 AC091167.2-201ENST00000579581 588 ntBASIC16.62■□□□□ 0.25
MT-ND3P03897 AL139424.1-201ENST00000607572 797 ntBASIC16.62■□□□□ 0.25
MT-ND3P03897 MIR3687-1-201ENST00000614492 61 ntBASIC16.62■□□□□ 0.25
MT-ND3P03897 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MT-ND3P03897 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MT-ND3P03897 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MT-ND3P03897 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND3P03897 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MT-ND3P03897 AC023824.1-201ENST00000562945 2975 ntBASIC16.62■□□□□ 0.25
MT-ND3P03897 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MT-ND3P03897 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
MT-ND3P03897 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MT-ND3P03897 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MT-ND3P03897 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
MT-ND3P03897 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MT-ND3P03897 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.61■□□□□ 0.25
MT-ND3P03897 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MT-ND3P03897 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.61■□□□□ 0.25
MT-ND3P03897 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.61■□□□□ 0.25
MT-ND3P03897 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.61■□□□□ 0.25
MT-ND3P03897 AC009947.1-201ENST00000444350 727 ntBASIC16.61■□□□□ 0.25
MT-ND3P03897 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.61■□□□□ 0.25
MT-ND3P03897 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.61■□□□□ 0.25
MT-ND3P03897 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.61■□□□□ 0.25
MT-ND3P03897 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
MT-ND3P03897 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.61■□□□□ 0.25
MT-ND3P03897 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.61■□□□□ 0.25
MT-ND3P03897 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MT-ND3P03897 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MT-ND3P03897 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 AC073347.1-201ENST00000421633 2643 ntBASIC16.61■□□□□ 0.25
MT-ND3P03897 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND3P03897 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.6■□□□□ 0.25
MT-ND3P03897 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND3P03897 MST1L-201ENST00000442552 2185 ntBASIC16.6■□□□□ 0.25
MT-ND3P03897 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MT-ND3P03897 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 AC022532.1-201ENST00000624563 1728 ntBASIC16.6■□□□□ 0.25
MT-ND3P03897 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.6■□□□□ 0.25
MT-ND3P03897 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND3P03897 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND3P03897 AC073621.1-201ENST00000392730 636 ntBASIC16.6■□□□□ 0.25
MT-ND3P03897 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.6■□□□□ 0.25
MT-ND3P03897 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
MT-ND3P03897 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND3P03897 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND3P03897 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.6■□□□□ 0.25
MT-ND3P03897 CYP2A7P1-201ENST00000595391 815 ntBASIC16.6■□□□□ 0.25
MT-ND3P03897 AC010654.1-201ENST00000615722 808 ntBASIC16.6■□□□□ 0.25
MT-ND3P03897 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
MT-ND3P03897 REXO1L3P-201ENST00000622202 1288 ntBASIC16.6■□□□□ 0.25
MT-ND3P03897 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND3P03897 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
MT-ND3P03897 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms