Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.24■□□□□ 0.03
HCN1O60741 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HCN1O60741 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 METTL21AP1-201ENST00000438852 635 ntBASIC15.24■□□□□ 0.03
HCN1O60741 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.24■□□□□ 0.03
HCN1O60741 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.24■□□□□ 0.03
HCN1O60741 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.24■□□□□ 0.03
HCN1O60741 AC023824.1-201ENST00000562945 2975 ntBASIC15.24■□□□□ 0.03
HCN1O60741 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.24■□□□□ 0.03
HCN1O60741 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.24■□□□□ 0.03
HCN1O60741 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.24■□□□□ 0.03
HCN1O60741 AL161645.1-201ENST00000622716 1255 ntBASIC15.24■□□□□ 0.03
HCN1O60741 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HCN1O60741 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HCN1O60741 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HCN1O60741 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HCN1O60741 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.24■□□□□ 0.03
HCN1O60741 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCN1O60741 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HCN1O60741 AC067930.6-201ENST00000623257 4947 ntBASIC15.24■□□□□ 0.03
HCN1O60741 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
HCN1O60741 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.23■□□□□ 0.03
HCN1O60741 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.23■□□□□ 0.03
HCN1O60741 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 HMGA1P7-201ENST00000406908 502 ntBASIC15.23■□□□□ 0.03
HCN1O60741 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HCN1O60741 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.23■□□□□ 0.03
HCN1O60741 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.23■□□□□ 0.03
HCN1O60741 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HCN1O60741 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.23■□□□□ 0.03
HCN1O60741 AP001350.2-201ENST00000625104 1094 ntBASIC15.23■□□□□ 0.03
HCN1O60741 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.23■□□□□ 0.03
HCN1O60741 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HCN1O60741 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HCN1O60741 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.23■□□□□ 0.03
HCN1O60741 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCN1O60741 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
HCN1O60741 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.22■□□□□ 0.03
HCN1O60741 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.22■□□□□ 0.03
HCN1O60741 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HCN1O60741 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HCN1O60741 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HCN1O60741 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HCN1O60741 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.22■□□□□ 0.03
HCN1O60741 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 AL365203.3-201ENST00000609742 2057 ntBASIC15.22■□□□□ 0.03
HCN1O60741 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.22■□□□□ 0.03
HCN1O60741 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 AL355306.1-201ENST00000415580 579 ntBASIC15.22■□□□□ 0.03
HCN1O60741 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.22■□□□□ 0.03
HCN1O60741 AL671277.1-201ENST00000429656 993 ntBASIC15.22■□□□□ 0.03
HCN1O60741 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms