Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 TUBB8P12-201ENST00000308911 1335 ntBASIC16.1■□□□□ 0.17
PCDHGA12O60330 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 TUBB7P-202ENST00000428444 1305 ntBASIC16.1■□□□□ 0.17
PCDHGA12O60330 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 TUBB8P7-204ENST00000567960 1332 ntBASIC16.1■□□□□ 0.17
PCDHGA12O60330 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 AC087499.6-201ENST00000411576 835 ntBASIC16.09■□□□□ 0.17
PCDHGA12O60330 AL080243.2-201ENST00000418783 582 ntBASIC16.09■□□□□ 0.17
PCDHGA12O60330 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 BANF1P1-201ENST00000553684 263 ntBASIC16.09■□□□□ 0.17
PCDHGA12O60330 AL079307.3-201ENST00000556114 283 ntBASIC16.09■□□□□ 0.17
PCDHGA12O60330 AC004840.1-201ENST00000636359 365 ntBASIC16.09■□□□□ 0.17
PCDHGA12O60330 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA12O60330 PCDHA1-201ENST00000378133 2726 ntBASIC16.09■□□□□ 0.17
PCDHGA12O60330 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA12O60330 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA12O60330 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
PCDHGA12O60330 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.08■□□□□ 0.17
PCDHGA12O60330 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHGA12O60330 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.08■□□□□ 0.17
PCDHGA12O60330 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PCDHGA12O60330 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA12O60330 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
PCDHGA12O60330 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA12O60330 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA12O60330 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA12O60330 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA12O60330 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA12O60330 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 AC135586.1-201ENST00000539323 574 ntBASIC16.08■□□□□ 0.16
PCDHGA12O60330 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA12O60330 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms