Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF3IP2O43734 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF3IP2O43734 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAF3IP2O43734 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAF3IP2O43734 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 AL139384.1-201ENST00000612143 3047 ntBASIC14.47□□□□□ -0.09
TRAF3IP2O43734 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 CDC14C-201ENST00000428251 1719 ntBASIC14.47□□□□□ -0.09
TRAF3IP2O43734 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 AC069224.1-201ENST00000566372 1715 ntBASIC14.47□□□□□ -0.09
TRAF3IP2O43734 LINC02199-201ENST00000506655 2702 ntBASIC14.47□□□□□ -0.09
TRAF3IP2O43734 AL365203.3-201ENST00000609742 2057 ntBASIC14.47□□□□□ -0.09
TRAF3IP2O43734 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 FAM220BP-201ENST00000377689 816 ntBASIC14.47□□□□□ -0.09
TRAF3IP2O43734 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 AC004461.1-201ENST00000412461 403 ntBASIC14.47□□□□□ -0.09
TRAF3IP2O43734 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 AC061975.2-201ENST00000581722 295 ntBASIC14.47□□□□□ -0.09
TRAF3IP2O43734 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 AC008677.1-201ENST00000519230 1561 ntBASIC14.47□□□□□ -0.09
TRAF3IP2O43734 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF3IP2O43734 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 UXT-AS1-201ENST00000590504 1525 ntBASIC14.46□□□□□ -0.09
TRAF3IP2O43734 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 AC022188.1-201ENST00000620960 1664 ntBASIC14.46□□□□□ -0.09
TRAF3IP2O43734 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 HAUS4P1-201ENST00000406739 1145 ntBASIC14.46□□□□□ -0.09
TRAF3IP2O43734 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 LINC02447-202ENST00000501888 2146 ntBASIC14.46□□□□□ -0.09
TRAF3IP2O43734 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 SLC25A39P2-201ENST00000537614 270 ntBASIC14.46□□□□□ -0.09
TRAF3IP2O43734 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 AC010491.1-201ENST00000563101 2797 ntBASIC14.46□□□□□ -0.09
TRAF3IP2O43734 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms