Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXA2O43364 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXA2O43364 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HOXA2O43364 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXA2O43364 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXA2O43364 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.22■□□□□ 0.35
HOXA2O43364 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXA2O43364 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXA2O43364 AC008735.3-201ENST00000596646 500 ntBASIC17.22■□□□□ 0.35
HOXA2O43364 AC010319.3-201ENST00000597028 470 ntBASIC17.22■□□□□ 0.35
HOXA2O43364 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXA2O43364 AC133539.2-201ENST00000604757 467 ntBASIC17.22■□□□□ 0.35
HOXA2O43364 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXA2O43364 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXA2O43364 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 AP001282.1-201ENST00000531301 1499 ntBASIC17.22■□□□□ 0.35
HOXA2O43364 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HOXA2O43364 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HOXA2O43364 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXA2O43364 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXA2O43364 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HOXA2O43364 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
HOXA2O43364 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXA2O43364 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXA2O43364 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.21■□□□□ 0.35
HOXA2O43364 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXA2O43364 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.21■□□□□ 0.35
HOXA2O43364 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HOXA2O43364 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HOXA2O43364 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.21■□□□□ 0.35
HOXA2O43364 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HOXA2O43364 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 TMEM14DP-201ENST00000422205 345 ntBASIC17.21■□□□□ 0.35
HOXA2O43364 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.21■□□□□ 0.35
HOXA2O43364 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXA2O43364 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC17.21■□□□□ 0.35
HOXA2O43364 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.21■□□□□ 0.35
HOXA2O43364 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.21■□□□□ 0.35
HOXA2O43364 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXA2O43364 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.21■□□□□ 0.35
HOXA2O43364 AC132872.1-201ENST00000566986 1195 ntBASIC17.21■□□□□ 0.35
HOXA2O43364 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.21■□□□□ 0.35
HOXA2O43364 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.21■□□□□ 0.35
HOXA2O43364 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXA2O43364 PCDHB18P-201ENST00000524813 2368 ntBASIC17.21■□□□□ 0.34
HOXA2O43364 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
HOXA2O43364 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HOXA2O43364 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HOXA2O43364 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HOXA2O43364 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
HOXA2O43364 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXA2O43364 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXA2O43364 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HOXA2O43364 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
HOXA2O43364 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXA2O43364 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.2■□□□□ 0.34
HOXA2O43364 RPL13AP25-201ENST00000484130 612 ntBASIC17.2■□□□□ 0.34
HOXA2O43364 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.2■□□□□ 0.34
HOXA2O43364 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.2■□□□□ 0.34
HOXA2O43364 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.2■□□□□ 0.34
HOXA2O43364 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC17.2■□□□□ 0.34
HOXA2O43364 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXA2O43364 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HOXA2O43364 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXA2O43364 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms