Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.83■□□□□ 0.28
MSI1O43347 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.83■□□□□ 0.28
MSI1O43347 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.83■□□□□ 0.28
MSI1O43347 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.83■□□□□ 0.28
MSI1O43347 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.83■□□□□ 0.28
MSI1O43347 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.83■□□□□ 0.28
MSI1O43347 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.83■□□□□ 0.28
MSI1O43347 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MSI1O43347 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MSI1O43347 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.83■□□□□ 0.28
MSI1O43347 AL589739.1-201ENST00000607720 493 ntBASIC16.83■□□□□ 0.28
MSI1O43347 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
MSI1O43347 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.83■□□□□ 0.28
MSI1O43347 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MSI1O43347 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.82■□□□□ 0.28
MSI1O43347 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.82■□□□□ 0.28
MSI1O43347 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MSI1O43347 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
MSI1O43347 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MSI1O43347 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.82■□□□□ 0.28
MSI1O43347 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.82■□□□□ 0.28
MSI1O43347 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
MSI1O43347 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
MSI1O43347 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MSI1O43347 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
MSI1O43347 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.82■□□□□ 0.28
MSI1O43347 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.82■□□□□ 0.28
MSI1O43347 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.82■□□□□ 0.28
MSI1O43347 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.82■□□□□ 0.28
MSI1O43347 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.82■□□□□ 0.28
MSI1O43347 AC027369.6-201ENST00000525520 931 ntBASIC16.82■□□□□ 0.28
MSI1O43347 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.82■□□□□ 0.28
MSI1O43347 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MSI1O43347 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.82■□□□□ 0.28
MSI1O43347 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.82■□□□□ 0.28
MSI1O43347 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.82■□□□□ 0.28
MSI1O43347 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.82■□□□□ 0.28
MSI1O43347 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.82■□□□□ 0.28
MSI1O43347 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MSI1O43347 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.82■□□□□ 0.28
MSI1O43347 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
MSI1O43347 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.82■□□□□ 0.28
MSI1O43347 LINC02199-201ENST00000506655 2702 ntBASIC16.82■□□□□ 0.28
MSI1O43347 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSI1O43347 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.81■□□□□ 0.28
MSI1O43347 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MSI1O43347 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MSI1O43347 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MSI1O43347 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MSI1O43347 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
MSI1O43347 RPL37AP1-201ENST00000412502 279 ntBASIC16.81■□□□□ 0.28
MSI1O43347 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.81■□□□□ 0.28
MSI1O43347 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
MSI1O43347 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.81■□□□□ 0.28
MSI1O43347 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.81■□□□□ 0.28
MSI1O43347 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.81■□□□□ 0.28
MSI1O43347 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.81■□□□□ 0.28
MSI1O43347 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSI1O43347 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms