Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.19■□□□□ 0.18
PHGDHO43175 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.19■□□□□ 0.18
PHGDHO43175 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.19■□□□□ 0.18
PHGDHO43175 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
PHGDHO43175 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.19■□□□□ 0.18
PHGDHO43175 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PHGDHO43175 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 RHOQP3-201ENST00000437982 621 ntBASIC16.19■□□□□ 0.18
PHGDHO43175 AC093724.1-201ENST00000448659 1027 ntBASIC16.19■□□□□ 0.18
PHGDHO43175 AC009078.2-202ENST00000463353 338 ntBASIC16.19■□□□□ 0.18
PHGDHO43175 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.19■□□□□ 0.18
PHGDHO43175 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.19■□□□□ 0.18
PHGDHO43175 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.19■□□□□ 0.18
PHGDHO43175 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.19■□□□□ 0.18
PHGDHO43175 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.19■□□□□ 0.18
PHGDHO43175 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.19■□□□□ 0.18
PHGDHO43175 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PHGDHO43175 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PHGDHO43175 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PHGDHO43175 AC073347.1-201ENST00000421633 2643 ntBASIC16.18■□□□□ 0.18
PHGDHO43175 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
PHGDHO43175 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.18■□□□□ 0.18
PHGDHO43175 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.18■□□□□ 0.18
PHGDHO43175 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.18■□□□□ 0.18
PHGDHO43175 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PHGDHO43175 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PHGDHO43175 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.18■□□□□ 0.18
PHGDHO43175 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.18■□□□□ 0.18
PHGDHO43175 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.18■□□□□ 0.18
PHGDHO43175 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.18■□□□□ 0.18
PHGDHO43175 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.18■□□□□ 0.18
PHGDHO43175 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PHGDHO43175 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.18■□□□□ 0.18
PHGDHO43175 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.18■□□□□ 0.18
PHGDHO43175 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.18■□□□□ 0.18
PHGDHO43175 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.18■□□□□ 0.18
PHGDHO43175 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PHGDHO43175 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PHGDHO43175 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHGDHO43175 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PHGDHO43175 AC016027.1-202ENST00000607927 1699 ntBASIC16.18■□□□□ 0.18
PHGDHO43175 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PHGDHO43175 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 AC008677.1-201ENST00000519230 1561 ntBASIC16.17■□□□□ 0.18
PHGDHO43175 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PHGDHO43175 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PHGDHO43175 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.17■□□□□ 0.18
PHGDHO43175 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.17■□□□□ 0.18
PHGDHO43175 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.17■□□□□ 0.18
PHGDHO43175 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PHGDHO43175 AC109635.5-201ENST00000533593 962 ntBASIC16.17■□□□□ 0.18
PHGDHO43175 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
PHGDHO43175 KRT126P-201ENST00000549467 1181 ntBASIC16.17■□□□□ 0.18
PHGDHO43175 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.17■□□□□ 0.18
PHGDHO43175 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.17■□□□□ 0.18
PHGDHO43175 AC018845.2-201ENST00000568326 409 ntBASIC16.17■□□□□ 0.18
PHGDHO43175 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.17■□□□□ 0.18
PHGDHO43175 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 Z83851.2-201ENST00000609564 659 ntBASIC16.17■□□□□ 0.18
PHGDHO43175 AL078644.1-201ENST00000609881 752 ntBASIC16.17■□□□□ 0.18
PHGDHO43175 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PHGDHO43175 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms