Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 PPT1-215ENST00000641471 2368 ntBASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 AC126335.2-201ENST00000623362 4637 ntBASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 AC010331.1-201ENST00000611423 582 ntBASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 AC010654.1-201ENST00000615722 808 ntBASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 TNRC18P2-201ENST00000417666 2714 ntBASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 AC131009.4-201ENST00000624048 1740 ntBASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 AL671277.2-201ENST00000458060 996 ntBASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 AC091167.2-201ENST00000579581 588 ntBASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 Z69720.1-201ENST00000601483 472 ntBASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 AL353135.1-201ENST00000606729 504 ntBASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 AC016027.1-202ENST00000607927 1699 ntBASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.65□□□□□ -0.22
KCNIP3Q9Y2W7 AC073508.3-201ENST00000619697 1419 ntBASIC13.64□□□□□ -0.23
KCNIP3Q9Y2W7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP3Q9Y2W7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP3Q9Y2W7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP3Q9Y2W7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP3Q9Y2W7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.64□□□□□ -0.23
KCNIP3Q9Y2W7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
KCNIP3Q9Y2W7 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP3Q9Y2W7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP3Q9Y2W7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms