Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 AC026979.3-201ENST00000607315 403 ntBASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 Z92544.3-201ENST00000624747 417 ntBASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 AC112504.1-201ENST00000623415 1841 ntBASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 METTL21AP1-201ENST00000438852 635 ntBASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 AC025678.2-201ENST00000562061 970 ntBASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 AC093028.1-201ENST00000622998 982 ntBASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHA4Q9UN74 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 AC010491.1-201ENST00000563101 2797 ntBASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 AC243562.2-201ENST00000561247 970 ntBASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 AC134407.2-201ENST00000625089 1978 ntBASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHA4Q9UN74 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 AL035456.1-201ENST00000456064 1369 ntBASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms