Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC3Q9UN70 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 AC134407.2-201ENST00000625089 1978 ntBASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 AC004987.2-201ENST00000395959 1148 ntBASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 AL139010.1-201ENST00000454878 894 ntBASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 AC018529.1-201ENST00000613063 361 ntBASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGC3Q9UN70 AC008894.3-201ENST00000624324 3103 ntBASIC17.08■□□□□ 0.33
PCDHGC3Q9UN70 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGC3Q9UN70 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGC3Q9UN70 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGC3Q9UN70 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PCDHGC3Q9UN70 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGC3Q9UN70 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGC3Q9UN70 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGC3Q9UN70 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.08■□□□□ 0.33
PCDHGC3Q9UN70 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGC3Q9UN70 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 AL136982.4-201ENST00000437689 1740 ntBASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 MIR1233-2-201ENST00000408138 82 ntBASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 MIR1233-1-201ENST00000408722 82 ntBASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 AC026150.2-201ENST00000564693 1156 ntBASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 AC027612.4-201ENST00000605371 583 ntBASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 AC026979.3-201ENST00000607315 403 ntBASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGC3Q9UN70 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC3Q9UN70 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGC3Q9UN70 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGC3Q9UN70 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC3Q9UN70 BNIP3P1-202ENST00000550043 1585 ntBASIC17.07■□□□□ 0.32
PCDHGC3Q9UN70 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC3Q9UN70 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGC3Q9UN70 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms