Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC23.12■■□□□ 1.29
STAG3Q9UJ98 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
STAG3Q9UJ98 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
STAG3Q9UJ98 AC010328.2-201ENST00000597698 1111 ntBASIC23.12■■□□□ 1.29
STAG3Q9UJ98 AC243960.2-201ENST00000600996 747 ntBASIC23.12■■□□□ 1.29
STAG3Q9UJ98 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC23.12■■□□□ 1.29
STAG3Q9UJ98 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
STAG3Q9UJ98 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
STAG3Q9UJ98 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC23.12■■□□□ 1.29
STAG3Q9UJ98 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC23.12■■□□□ 1.29
STAG3Q9UJ98 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
STAG3Q9UJ98 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 AL603756.1-201ENST00000606511 2163 ntBASIC23.11■■□□□ 1.29
STAG3Q9UJ98 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 LINC01144-201ENST00000626198 1710 ntBASIC23.11■■□□□ 1.29
STAG3Q9UJ98 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 AC004987.2-201ENST00000395959 1148 ntBASIC23.11■■□□□ 1.29
STAG3Q9UJ98 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 SOCS2P1-201ENST00000417727 557 ntBASIC23.11■■□□□ 1.29
STAG3Q9UJ98 YBX1P6-201ENST00000442962 1002 ntBASIC23.11■■□□□ 1.29
STAG3Q9UJ98 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 IGHV3OR16-16-201ENST00000563644 343 ntBASIC23.11■■□□□ 1.29
STAG3Q9UJ98 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 AMT-206ENST00000458307 1860 ntTSL 2 BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
STAG3Q9UJ98 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 AP000812.2-201ENST00000538934 718 ntBASIC23.1■■□□□ 1.29
STAG3Q9UJ98 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 ACE-204ENST00000428043 5120 ntTSL 2 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
STAG3Q9UJ98 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 AL691432.1-201ENST00000596308 1422 ntBASIC23.09■■□□□ 1.29
STAG3Q9UJ98 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 FTH1P14-201ENST00000482930 551 ntBASIC23.09■■□□□ 1.29
STAG3Q9UJ98 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 MIR3615-201ENST00000581999 87 ntBASIC23.09■■□□□ 1.29
STAG3Q9UJ98 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 INTS4P2-202ENST00000614726 2019 ntBASIC23.09■■□□□ 1.29
STAG3Q9UJ98 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 NEFHP1-201ENST00000412845 2629 ntBASIC23.09■■□□□ 1.29
STAG3Q9UJ98 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
STAG3Q9UJ98 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 GRN-214ENST00000589265 1632 ntTSL 5 BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
STAG3Q9UJ98 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms