Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 MRPS18AP1-201ENST00000414458 589 ntBASIC15.28■□□□□ 0.04
CTSFQ9UBX1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 POU5F1P6-201ENST00000466990 990 ntBASIC15.28■□□□□ 0.04
CTSFQ9UBX1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 AC092850.2-201ENST00000623821 2697 ntBASIC15.28■□□□□ 0.04
CTSFQ9UBX1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSFQ9UBX1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 AL035633.1-201ENST00000406139 838 ntBASIC15.27■□□□□ 0.04
CTSFQ9UBX1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSFQ9UBX1 AC138761.1-201ENST00000584393 385 ntBASIC15.27■□□□□ 0.04
CTSFQ9UBX1 AC026979.3-201ENST00000607315 403 ntBASIC15.27■□□□□ 0.04
CTSFQ9UBX1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSFQ9UBX1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CTSFQ9UBX1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTSFQ9UBX1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSFQ9UBX1 AC022144.1-201ENST00000602255 1580 ntBASIC15.27■□□□□ 0.03
CTSFQ9UBX1 AL118508.1-201ENST00000613502 2345 ntBASIC15.27■□□□□ 0.03
CTSFQ9UBX1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSFQ9UBX1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.27■□□□□ 0.03
CTSFQ9UBX1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.27■□□□□ 0.03
CTSFQ9UBX1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.27■□□□□ 0.03
CTSFQ9UBX1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms