Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 MIR648-201ENST00000385046 94 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 MRPL20P1-201ENST00000400819 433 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 AC108751.1-201ENST00000490852 363 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 UNC93B6-202ENST00000528242 690 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 AC087641.1-201ENST00000557561 1021 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 AC145285.3-201ENST00000564603 959 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 Z83851.2-201ENST00000609564 659 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 REXO1L3P-201ENST00000622202 1288 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 AC103702.1-201ENST00000548801 2630 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 ZNF259P1-201ENST00000407656 1365 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 PCDHA3-202ENST00000532566 4594 ntBASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 AP005117.1-202ENST00000581724 1908 ntBASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 AC108073.2-201ENST00000464002 357 ntBASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 RNA5SP415-201ENST00000517246 115 ntBASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 AL161772.1-201ENST00000610494 4412 ntBASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIN7CQ9NUP9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 OR2I1P-209ENST00000641730 5365 ntBASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIN7CQ9NUP9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms