Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 AC074338.1-201ENST00000416825 156 ntBASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 AL442647.2-201ENST00000429864 857 ntBASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 FAM8A2P-201ENST00000528813 1142 ntBASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 AL583810.1-201ENST00000553344 1045 ntBASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 AC133539.2-201ENST00000604757 467 ntBASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 AC009053.2-201ENST00000563701 2365 ntBASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 UBALD1-205ENST00000590891 2641 ntBASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 AC004987.2-201ENST00000395959 1148 ntBASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 ACTBP11-201ENST00000436287 1126 ntBASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 AL162726.2-201ENST00000438986 1017 ntBASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 KLF2P4-201ENST00000451959 1225 ntBASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 TDH-203ENST00000531764 1110 ntBASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 AL359711.2-201ENST00000563105 872 ntBASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 GPR182-203ENST00000622922 591 ntBASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 RNF216P1-203ENST00000404404 2427 ntBASIC17.66■□□□□ 0.42
TRMT13Q9NUP7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 MIR1908-201ENST00000410394 80 ntBASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 AC099336.1-201ENST00000417053 1171 ntBASIC17.65■□□□□ 0.42
TRMT13Q9NUP7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms