Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 AC092933.1-201ENST00000393644 945 ntBASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 MIR1908-201ENST00000410394 80 ntBASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 BCYRN1-201ENST00000418539 200 ntBASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 RN7SL219P-201ENST00000582872 296 ntBASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 TMEM261P1-201ENST00000604899 340 ntBASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 MIR6869-201ENST00000619434 62 ntBASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 AL033527.5-201ENST00000641382 801 ntBASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM7Q9NR12 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM7Q9NR12 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM7Q9NR12 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM7Q9NR12 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM7Q9NR12 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM7Q9NR12 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM7Q9NR12 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM7Q9NR12 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18■□□□□ 0.47
PDLIM7Q9NR12 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM7Q9NR12 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM7Q9NR12 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 HAUS4P1-201ENST00000406739 1145 ntBASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 USP32P1-208ENST00000506594 1164 ntBASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 AL583810.1-201ENST00000553344 1045 ntBASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 RRP7BP-205ENST00000566851 833 ntBASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 BTNL10-201ENST00000595971 695 ntBASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 AC010319.3-201ENST00000597028 470 ntBASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 MIR8072-201ENST00000614241 80 ntBASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms